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Residue conformations -------------------------------------------
A1 : G C3p_endo anti
A2 : C C3p_endo anti
A3 : U C3p_endo anti
A4 : C C3p_endo anti
A5 : C C3p_endo anti
A6 : A C4p_exo anti
A7 : G C3p_exo anti
A8 : A C3p_endo anti
A9 : U C3p_endo anti
A10 : G C3p_endo anti
A11 : G C3p_endo anti
A12 : A C3p_endo anti
A13 : G C3p_endo anti
A14 : C C3p_endo anti
A15 : G C4p_exo anti
Adjacent stackings ----------------------------------------------
A1-A2 : adjacent_5p upward
A2-A3 : adjacent_5p upward
A3-A4 : adjacent_5p upward
A4-A5 : adjacent_5p upward
A8-A9 : adjacent_5p upward
A10-A11 : adjacent_5p upward
A11-A12 : adjacent_5p upward
A12-A13 : adjacent_5p upward
A13-A14 : adjacent_5p upward
Non-Adjacent stackings ------------------------------------------
A1-A15 : outward
Number of stackings = 10
Number of adjacent stackings = 9
Number of non adjacent stackings = 1
Base-pairs ------------------------------------------------------
A1-A14 : G-C Ww/Ww pairing antiparallel cis XIX
A2-A13 : C-G Ww/Ww pairing antiparallel cis XIX
A3-A12 : U-A Ww/Ww pairing antiparallel cis XX
A4-A11 : C-G Ww/Ww pairing antiparallel cis XIX
A5-A6 : C-A O2P/Ss O2P/C8 adjacent_5p pairing
A5-A10 : C-G Ww/Ww pairing antiparallel cis XIX
Residue conformations -------------------------------------------
A1 : G C3p_endo anti
A2 : C C3p_endo anti
A3 : U C3p_endo anti
A4 : C C3p_endo anti
A5 : C C3p_endo anti
A6 : A C3p_endo anti
A7 : G C2p_endo anti
A8 : A C3p_endo anti
A9 : U C3p_endo anti
A10 : G C3p_endo anti
A11 : G C3p_endo anti
A12 : A C3p_endo anti
A13 : G C3p_endo anti
A14 : C C3p_endo anti
A15 : G C3p_endo anti
Adjacent stackings ----------------------------------------------
A1-A2 : adjacent_5p upward
A3-A4 : adjacent_5p upward
A4-A5 : adjacent_5p upward
A8-A9 : adjacent_5p upward
A10-A11 : adjacent_5p upward
A11-A12 : adjacent_5p upward
A12-A13 : adjacent_5p upward
A13-A14 : adjacent_5p upward
Non-Adjacent stackings ------------------------------------------
Number of stackings = 8
Number of adjacent stackings = 8
Number of non adjacent stackings = 0
Base-pairs ------------------------------------------------------
A1-A14 : G-C Ww/Ww pairing antiparallel cis XIX
A1-A15 : G-G O2'/Bs pairing
A2-A13 : C-G Ww/Ww pairing antiparallel cis XIX
A3-A12 : U-A Ww/Ww pairing antiparallel cis XX
A4-A11 : C-G Ww/Ww pairing antiparallel cis XIX
A5-A10 : C-G Ww/Ww pairing antiparallel cis XIX
A7-A10 : G-G Sw/Ss O2'/Bs Bs/O2' pairing parallel cis one_hbond
Residue conformations -------------------------------------------
A1 : G C4p_exo anti
A2 : C C3p_endo anti
A3 : U C3p_endo anti
A4 : C C3p_endo anti
A5 : C C3p_endo anti
A6 : A C3p_endo anti
A7 : G C2p_endo anti
A8 : A C3p_endo anti
A9 : U C3p_endo anti
A10 : G C3p_endo anti
A11 : G C3p_endo anti
A12 : A C3p_endo anti
A13 : G C3p_endo anti
A14 : C C3p_endo anti
A15 : G C4p_exo anti
Adjacent stackings ----------------------------------------------
A1-A2 : adjacent_5p upward
A2-A3 : adjacent_5p upward
A3-A4 : adjacent_5p upward
A4-A5 : adjacent_5p upward
A8-A9 : adjacent_5p upward
A10-A11 : adjacent_5p upward
A11-A12 : adjacent_5p upward
A12-A13 : adjacent_5p upward
A13-A14 : adjacent_5p upward
Non-Adjacent stackings ------------------------------------------
Number of stackings = 9
Number of adjacent stackings = 9
Number of non adjacent stackings = 0
Base-pairs ------------------------------------------------------
A1-A14 : G-C Ww/Ww pairing antiparallel cis XIX
A1-A15 : G-G Bs/Hh pairing antiparallel trans 34
A2-A13 : C-G Ww/Ww pairing antiparallel cis XIX
A3-A12 : U-A Ww/Ww pairing antiparallel cis XX
A4-A11 : C-G Ww/Ww pairing antiparallel cis XIX
A5-A6 : C-A O2P/Hh O2P/Ss adjacent_5p pairing
A5-A10 : C-G Ww/Ww pairing antiparallel cis XIX
A9-A10 : U-G O2P/Hh adjacent_5p pairing
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