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Residue conformations -------------------------------------------
A68 : G C3p_endo anti
A69 : G C3p_endo anti
A70 : C C3p_endo anti
A71 : C C3p_endo anti
A72 : G C3p_endo anti
A73 : A C2p_exo anti
A74 : U C3p_endo anti
A75 : G C3p_endo anti
A76 : G C3p_endo anti
A77 : U C3p_endo anti
A78 : A C3p_endo anti
A79 : G C3p_endo anti
A80 : U C3p_endo anti
A81 : G C3p_endo anti
A82 : U C3p_endo anti
A83 : G C3p_endo anti
A84 : G C3p_endo anti
A85 : G C3p_endo anti
A86 : G C3p_endo anti
A87 : U C4p_exo anti
A88 : C C2p_endo anti
B89 : U C3p_endo anti
B90 : C C2p_exo anti
B91 : C C3p_endo anti
B92 : C C3p_endo anti
B93 : C C3p_endo anti
B94 : A C3p_endo anti
B95 : U C3p_endo anti
B96 : G C3p_endo anti
B97 : C C3p_endo anti
B98 : G C3p_endo anti
B99 : A C2p_exo anti
B100 : G C3p_endo anti
B101 : A C2p_exo anti
B102 : G C3p_endo anti
B103 : U C3p_endo anti
B104 : A C3p_endo anti
B105 : G C3p_endo anti
B106 : G C3p_endo anti
B107 : C C3p_endo anti
B108 : C C3p_endo anti
Adjacent stackings ----------------------------------------------
A68-A69 : adjacent_5p upward
A69-A70 : adjacent_5p upward
A71-A72 : adjacent_5p upward
A73-A74 : adjacent_5p upward
A74-A75 : adjacent_5p upward
A75-A76 : adjacent_5p upward
A76-A77 : adjacent_5p upward
A77-A78 : adjacent_5p upward
A78-A79 : adjacent_5p upward
A79-A80 : adjacent_5p upward
A81-A82 : adjacent_5p upward
A82-A83 : adjacent_5p upward
A83-A84 : adjacent_5p upward
A84-A85 : adjacent_5p upward
A85-A86 : adjacent_5p upward
B93-B94 : adjacent_5p upward
B94-B95 : adjacent_5p upward
B96-B97 : adjacent_5p upward
B97-B98 : adjacent_5p upward
B99-B100 : adjacent_5p upward
B100-B101 : adjacent_5p upward
B101-B102 : adjacent_5p upward
B102-B103 : adjacent_5p upward
B103-B104 : adjacent_5p upward
B104-B105 : adjacent_5p upward
B105-B106 : adjacent_5p upward
B106-B107 : adjacent_5p upward
Non-Adjacent stackings ------------------------------------------
A73-B104 : outward
A78-B99 : outward
A81-B96 : outward
A83-B94 : outward
Number of stackings = 31
Number of adjacent stackings = 27
Number of non adjacent stackings = 4
Base-pairs ------------------------------------------------------
A68-B108 : G-C Ww/Ww pairing antiparallel cis XIX
A69-B107 : G-C Ww/Ww pairing antiparallel cis XIX
A70-B106 : C-G Ww/Ww pairing antiparallel cis XIX
A71-B105 : C-G Ww/Ww pairing antiparallel cis XIX
A72-B102 : G-G Hh/O2P pairing
A72-B103 : G-U Ww/O2P Bs/O2P pairing
A72-B104 : G-A Ss/Hh pairing antiparallel trans XI
A73-B103 : A-U Hh/Ws pairing antiparallel trans XXIV
A74-B102 : U-G Hh/Ww pairing antiparallel trans one_hbond 91
A75-B101 : G-A Hw/Wh pairing antiparallel cis one_hbond 64
A76-B100 : G-G Ww/Bh pairing antiparallel trans 115
A77-B99 : U-A Ws/Hh pairing antiparallel trans XXIV
A78-B98 : A-G Hh/Ss Bh/O2' pairing antiparallel trans XI
A79-B97 : G-C Ww/Ww pairing antiparallel cis XIX
A80-B96 : U-G Ws/Ww pairing antiparallel cis XXVIII
A81-B95 : G-U Ww/Ws pairing antiparallel cis XXVIII
A82-B94 : U-A Ww/Ww pairing antiparallel cis XX
A83-B93 : G-C Ww/Ww pairing antiparallel cis XIX
A84-B92 : G-C Ww/Ww pairing antiparallel cis XIX
A85-B91 : G-C Ww/Ww pairing antiparallel cis XIX
A86-B90 : G-C Bs/Ww pairing antiparallel cis 128
B89-B90 : U-C O2P/Ww O2P/Bh adjacent_5p pairing
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