| Residue conformations ------------------------------------------- | |
| R3 : A C3p_endo anti | |
| R4 : U C3p_endo anti | |
| R5 : G C3p_endo anti | |
| R6 : A C2p_exo syn | |
| R7 : G C3p_endo anti | |
| R8 : G C3p_endo anti | |
| R9 : A C3p_endo anti | |
| R10 : U C2p_endo anti | |
| R11 : U C2p_endo anti | |
| R12 : A C2p_endo anti | |
| R13 : C C3p_endo anti | |
| R14 : C C3p_endo anti | |
| R15 : C C3p_endo anti | |
| R16 : A C3p_endo anti | |
| R17 : U C3p_endo anti | |
| R18 : G C4p_exo anti | |
| S4 : U C3p_endo anti | |
| S5 : G C3p_endo anti | |
| S6 : A C2p_exo syn | |
| S7 : G C3p_endo anti | |
| S8 : G C3p_endo anti | |
| S9 : A C3p_endo anti | |
| S10 : U C1p_exo anti | |
| S11 : U C2p_endo anti | |
| S12 : A C2p_endo anti | |
| S13 : C C3p_endo anti | |
| S14 : C C3p_endo anti | |
| S15 : C C3p_endo anti | |
| A1 : ALA | |
| A2 : SER | |
| A3 : ASN | |
| A4 : PHE | |
| A5 : THR | |
| A6 : GLN | |
| A7 : PHE | |
| A8 : VAL | |
| A9 : LEU | |
| A10 : VAL | |
| A11 : ASP | |
| A12 : ASN | |
| A13 : GLY | |
| A14 : GLY | |
| A15 : THR | |
| A16 : GLY | |
| A17 : ASP | |
| A18 : VAL | |
| A19 : THR | |
| A20 : VAL | |
| A21 : ALA | |
| A22 : PRO | |
| A23 : SER | |
| A24 : ASN | |
| A25 : PHE | |
| A26 : ALA | |
| A27 : ASN | |
| A28 : GLY | |
| A29 : VAL | |
| A30 : ALA | |
| A31 : GLU | |
| A32 : TRP | |
| A33 : ILE | |
| A34 : SER | |
| A35 : SER | |
| A36 : ASN | |
| A37 : SER | |
| A38 : ARG | |
| A39 : SER | |
| A40 : GLN | |
| A41 : ALA | |
| A42 : TYR | |
| A43 : LYS | |
| A44 : VAL | |
| A45 : THR | |
| A46 : CYS | |
| A47 : SER | |
| A48 : VAL | |
| A49 : ARG | |
| A50 : GLN | |
| A51 : SER | |
| A52 : SER | |
| A53 : ALA | |
| A54 : GLN | |
| A55 : ASN | |
| A56 : ARG | |
| A57 : LYS | |
| A58 : TYR | |
| A59 : SER | |
| A60 : ILE | |
| A61 : LYS | |
| A62 : VAL | |
| A63 : GLU | |
| A64 : VAL | |
| A65 : PRO | |
| A66 : LYS | |
| A67 : VAL | |
| A68 : ALA | |
| A69 : THR | |
| A70 : GLN | |
| A71 : THR | |
| A72 : VAL | |
| A73 : GLY | |
| A74 : GLY | |
| A75 : VAL | |
| A76 : GLU | |
| A77 : LEU | |
| A78 : PRO | |
| A79 : VAL | |
| A80 : ALA | |
| A81 : ALA | |
| A82 : TRP | |
| A83 : ARG | |
| A84 : SER | |
| A85 : TYR | |
| A86 : LEU | |
| A87 : ASN | |
| A88 : MET | |
| A89 : GLU | |
| A90 : LEU | |
| A91 : THR | |
| A92 : ILE | |
| A93 : PRO | |
| A94 : ILE | |
| A95 : PHE | |
| A96 : ALA | |
| A97 : THR | |
| A98 : ASN | |
| A99 : SER | |
| A100 : ASP | |
| A101 : CYS | |
| A102 : GLU | |
| A103 : LEU | |
| A104 : ILE | |
| A105 : VAL | |
| A106 : LYS | |
| A107 : ALA | |
| A108 : MET | |
| A109 : GLN | |
| A110 : GLY | |
| A111 : LEU | |
| A112 : LEU | |
| A113 : LYS | |
| A114 : ASP | |
| A115 : GLY | |
| A116 : ASN | |
| A117 : PRO | |
| A118 : ILE | |
| A119 : PRO | |
| A120 : SER | |
| A121 : ALA | |
| A122 : ILE | |
| A123 : ALA | |
| A124 : ALA | |
| A125 : ASN | |
| A126 : SER | |
| A127 : GLY | |
| A128 : ILE | |
| A129 : TYR | |
| B1 : ALA | |
| B2 : SER | |
| B3 : ASN | |
| B4 : PHE | |
| B5 : THR | |
| B6 : GLN | |
| B7 : PHE | |
| B8 : VAL | |
| B9 : LEU | |
| B10 : VAL | |
| B11 : ASP | |
| B12 : ASN | |
| B13 : GLY | |
| B14 : GLY | |
| B15 : THR | |
| B16 : GLY | |
| B17 : ASP | |
| B18 : VAL | |
| B19 : THR | |
| B20 : VAL | |
| B21 : ALA | |
| B22 : PRO | |
| B23 : SER | |
| B24 : ASN | |
| B25 : PHE | |
| B26 : ALA | |
| B27 : ASN | |
| B28 : GLY | |
| B29 : VAL | |
| B30 : ALA | |
| B31 : GLU | |
| B32 : TRP | |
| B33 : ILE | |
| B34 : SER | |
| B35 : SER | |
| B36 : ASN | |
| B37 : SER | |
| B38 : ARG | |
| B39 : SER | |
| B40 : GLN | |
| B41 : ALA | |
| B42 : TYR | |
| B43 : LYS | |
| B44 : VAL | |
| B45 : THR | |
| B46 : CYS | |
| B47 : SER | |
| B48 : VAL | |
| B49 : ARG | |
| B50 : GLN | |
| B51 : SER | |
| B52 : SER | |
| B53 : ALA | |
| B54 : GLN | |
| B55 : ASN | |
| B56 : ARG | |
| B57 : LYS | |
| B58 : TYR | |
| B59 : SER | |
| B60 : ILE | |
| B61 : LYS | |
| B62 : VAL | |
| B63 : GLU | |
| B64 : VAL | |
| B65 : PRO | |
| B66 : LYS | |
| B67 : VAL | |
| B68 : ALA | |
| B69 : THR | |
| B70 : GLN | |
| B71 : THR | |
| B72 : VAL | |
| B73 : GLY | |
| B74 : GLY | |
| B75 : VAL | |
| B76 : GLU | |
| B77 : LEU | |
| B78 : PRO | |
| B79 : VAL | |
| B80 : ALA | |
| B81 : ALA | |
| B82 : TRP | |
| B83 : ARG | |
| B84 : SER | |
| B85 : TYR | |
| B86 : LEU | |
| B87 : ASN | |
| B88 : MET | |
| B89 : GLU | |
| B90 : LEU | |
| B91 : THR | |
| B92 : ILE | |
| B93 : PRO | |
| B94 : ILE | |
| B95 : PHE | |
| B96 : ALA | |
| B97 : THR | |
| B98 : ASN | |
| B99 : SER | |
| B100 : ASP | |
| B101 : CYS | |
| B102 : GLU | |
| B103 : LEU | |
| B104 : ILE | |
| B105 : VAL | |
| B106 : LYS | |
| B107 : ALA | |
| B108 : MET | |
| B109 : GLN | |
| B110 : GLY | |
| B111 : LEU | |
| B112 : LEU | |
| B113 : LYS | |
| B114 : ASP | |
| B115 : GLY | |
| B116 : ASN | |
| B117 : PRO | |
| B118 : ILE | |
| B119 : PRO | |
| B120 : SER | |
| B121 : ALA | |
| B122 : ILE | |
| B123 : ALA | |
| B124 : ALA | |
| B125 : ASN | |
| B126 : SER | |
| B127 : GLY | |
| B128 : ILE | |
| B129 : TYR | |
| C1 : ALA | |
| C2 : SER | |
| C3 : ASN | |
| C4 : PHE | |
| C5 : THR | |
| C6 : GLN | |
| C7 : PHE | |
| C8 : VAL | |
| C9 : LEU | |
| C10 : VAL | |
| C11 : ASP | |
| C12 : ASN | |
| C13 : GLY | |
| C14 : GLY | |
| C15 : THR | |
| C16 : GLY | |
| C17 : ASP | |
| C18 : VAL | |
| C19 : THR | |
| C20 : VAL | |
| C21 : ALA | |
| C22 : PRO | |
| C23 : SER | |
| C24 : ASN | |
| C25 : PHE | |
| C26 : ALA | |
| C27 : ASN | |
| C28 : GLY | |
| C29 : VAL | |
| C30 : ALA | |
| C31 : GLU | |
| C32 : TRP | |
| C33 : ILE | |
| C34 : SER | |
| C35 : SER | |
| C36 : ASN | |
| C37 : SER | |
| C38 : ARG | |
| C39 : SER | |
| C40 : GLN | |
| C41 : ALA | |
| C42 : TYR | |
| C43 : LYS | |
| C44 : VAL | |
| C45 : THR | |
| C46 : CYS | |
| C47 : SER | |
| C48 : VAL | |
| C49 : ARG | |
| C50 : GLN | |
| C51 : SER | |
| C52 : SER | |
| C53 : ALA | |
| C54 : GLN | |
| C55 : ASN | |
| C56 : ARG | |
| C57 : LYS | |
| C58 : TYR | |
| C59 : SER | |
| C60 : ILE | |
| C61 : LYS | |
| C62 : VAL | |
| C63 : GLU | |
| C64 : VAL | |
| C65 : PRO | |
| C66 : LYS | |
| C67 : VAL | |
| C68 : ALA | |
| C69 : THR | |
| C70 : GLN | |
| C71 : THR | |
| C72 : VAL | |
| C73 : GLY | |
| C74 : GLY | |
| C75 : VAL | |
| C76 : GLU | |
| C77 : LEU | |
| C78 : PRO | |
| C79 : VAL | |
| C80 : ALA | |
| C81 : ALA | |
| C82 : TRP | |
| C83 : ARG | |
| C84 : SER | |
| C85 : TYR | |
| C86 : LEU | |
| C87 : ASN | |
| C88 : MET | |
| C89 : GLU | |
| C90 : LEU | |
| C91 : THR | |
| C92 : ILE | |
| C93 : PRO | |
| C94 : ILE | |
| C95 : PHE | |
| C96 : ALA | |
| C97 : THR | |
| C98 : ASN | |
| C99 : SER | |
| C100 : ASP | |
| C101 : CYS | |
| C102 : GLU | |
| C103 : LEU | |
| C104 : ILE | |
| C105 : VAL | |
| C106 : LYS | |
| C107 : ALA | |
| C108 : MET | |
| C109 : GLN | |
| C110 : GLY | |
| C111 : LEU | |
| C112 : LEU | |
| C113 : LYS | |
| C114 : ASP | |
| C115 : GLY | |
| C116 : ASN | |
| C117 : PRO | |
| C118 : ILE | |
| C119 : PRO | |
| C120 : SER | |
| C121 : ALA | |
| C122 : ILE | |
| C123 : ALA | |
| C124 : ALA | |
| C125 : ASN | |
| C126 : SER | |
| C127 : GLY | |
| C128 : ILE | |
| C129 : TYR | |
| R60 : HOH | |
| R214 : HOH | |
| R2059 : HOH | |
| S169 : HOH | |
| A130 : HOH | |
| A131 : HOH | |
| A132 : HOH | |
| A133 : HOH | |
| A134 : HOH | |
| A135 : HOH | |
| A136 : HOH | |
| A137 : HOH | |
| A138 : HOH | |
| A139 : HOH | |
| A140 : HOH | |
| A141 : HOH | |
| A142 : HOH | |
| A143 : HOH | |
| A144 : HOH | |
| A145 : HOH | |
| A146 : HOH | |
| A147 : HOH | |
| A148 : HOH | |
| A149 : HOH | |
| A150 : HOH | |
| A151 : HOH | |
| A152 : HOH | |
| A153 : HOH | |
| A154 : HOH | |
| A155 : HOH | |
| A156 : HOH | |
| A157 : HOH | |
| A158 : HOH | |
| A159 : HOH | |
| A160 : HOH | |
| A161 : HOH | |
| A162 : HOH | |
| A163 : HOH | |
| A164 : HOH | |
| A165 : HOH | |
| A166 : HOH | |
| A167 : HOH | |
| A168 : HOH | |
| A169 : HOH | |
| A170 : HOH | |
| A171 : HOH | |
| A172 : HOH | |
| A173 : HOH | |
| A174 : HOH | |
| A175 : HOH | |
| A176 : HOH | |
| A177 : HOH | |
| A178 : HOH | |
| A179 : HOH | |
| A180 : HOH | |
| A181 : HOH | |
| A182 : HOH | |
| A183 : HOH | |
| A184 : HOH | |
| A185 : HOH | |
| A186 : HOH | |
| A187 : HOH | |
| A188 : HOH | |
| A189 : HOH | |
| A190 : HOH | |
| A191 : HOH | |
| A192 : HOH | |
| A193 : HOH | |
| A194 : HOH | |
| A195 : HOH | |
| A196 : HOH | |
| A197 : HOH | |
| A198 : HOH | |
| A199 : HOH | |
| A200 : HOH | |
| A201 : HOH | |
| A202 : HOH | |
| A203 : HOH | |
| B130 : HOH | |
| B131 : HOH | |
| B132 : HOH | |
| B133 : HOH | |
| B134 : HOH | |
| B135 : HOH | |
| B136 : HOH | |
| B137 : HOH | |
| B138 : HOH | |
| B139 : HOH | |
| B140 : HOH | |
| B141 : HOH | |
| B142 : HOH | |
| B143 : HOH | |
| B144 : HOH | |
| B145 : HOH | |
| B146 : HOH | |
| B147 : HOH | |
| B148 : HOH | |
| B149 : HOH | |
| B150 : HOH | |
| B151 : HOH | |
| B152 : HOH | |
| B153 : HOH | |
| B154 : HOH | |
| B155 : HOH | |
| B156 : HOH | |
| B157 : HOH | |
| B158 : HOH | |
| B159 : HOH | |
| B160 : HOH | |
| B161 : HOH | |
| B162 : HOH | |
| B163 : HOH | |
| B164 : HOH | |
| B165 : HOH | |
| B166 : HOH | |
| B167 : HOH | |
| B168 : HOH | |
| B169 : HOH | |
| B170 : HOH | |
| B171 : HOH | |
| B172 : HOH | |
| B173 : HOH | |
| B174 : HOH | |
| B175 : HOH | |
| B176 : HOH | |
| B177 : HOH | |
| B178 : HOH | |
| B179 : HOH | |
| B180 : HOH | |
| B181 : HOH | |
| B182 : HOH | |
| B183 : HOH | |
| B184 : HOH | |
| B185 : HOH | |
| B186 : HOH | |
| B187 : HOH | |
| B188 : HOH | |
| B189 : HOH | |
| B190 : HOH | |
| B191 : HOH | |
| B192 : HOH | |
| B193 : HOH | |
| B194 : HOH | |
| B195 : HOH | |
| B196 : HOH | |
| C130 : HOH | |
| C131 : HOH | |
| C132 : HOH | |
| C133 : HOH | |
| C134 : HOH | |
| C135 : HOH | |
| C136 : HOH | |
| C137 : HOH | |
| C138 : HOH | |
| C139 : HOH | |
| C140 : HOH | |
| C141 : HOH | |
| C142 : HOH | |
| C143 : HOH | |
| C144 : HOH | |
| C145 : HOH | |
| C146 : HOH | |
| C147 : HOH | |
| C148 : HOH | |
| C149 : HOH | |
| C150 : HOH | |
| C151 : HOH | |
| C152 : HOH | |
| C153 : HOH | |
| C154 : HOH | |
| C155 : HOH | |
| C156 : HOH | |
| C157 : HOH | |
| C158 : HOH | |
| C159 : HOH | |
| C160 : HOH | |
| C161 : HOH | |
| C162 : HOH | |
| C163 : HOH | |
| C164 : HOH | |
| C165 : HOH | |
| C166 : HOH | |
| C167 : HOH | |
| C168 : HOH | |
| C169 : HOH | |
| C170 : HOH | |
| C171 : HOH | |
| C172 : HOH | |
| C173 : HOH | |
| C174 : HOH | |
| C175 : HOH | |
| C176 : HOH | |
| C177 : HOH | |
| C178 : HOH | |
| C179 : HOH | |
| C180 : HOH | |
| C181 : HOH | |
| C182 : HOH | |
| C183 : HOH | |
| C184 : HOH | |
| C185 : HOH | |
| C186 : HOH | |
| C187 : HOH | |
| C188 : HOH | |
| C189 : HOH | |
| C190 : HOH | |
| C191 : HOH | |
| C192 : HOH | |
| C193 : HOH | |
| C194 : HOH | |
| C195 : HOH | |
| C196 : HOH | |
| C197 : HOH | |
| C198 : HOH | |
| C199 : HOH | |
| C200 : HOH | |
| Adjacent stackings ---------------------------------------------- | |
| R3-R4 : adjacent_5p upward | |
| R7-R8 : adjacent_5p upward | |
| R8-R9 : adjacent_5p upward | |
| R15-R16 : adjacent_5p upward | |
| R16-R17 : adjacent_5p upward | |
| S4-S5 : adjacent_5p upward | |
| S7-S8 : adjacent_5p upward | |
| S8-S9 : adjacent_5p upward | |
| S13-S14 : adjacent_5p upward | |
| Non-Adjacent stackings ------------------------------------------ | |
| R3-R18 : outward | |
| R5-R7 : upward | |
| R5-R16 : outward | |
| R9-R11 : upward | |
| S5-S7 : upward | |
| S7-S15 : outward | |
| S9-S11 : upward | |
| S9-S13 : outward | |
| Number of stackings = 17 | |
| Number of adjacent stackings = 9 | |
| Number of non adjacent stackings = 8 | |
| Base-pairs ------------------------------------------------------ | |
| R3-R17 : A-U Ww/Ww pairing antiparallel cis XX | |
| R4-R16 : U-A Ww/Ww pairing antiparallel cis XX | |
| R5-R15 : G-C Ww/Ww pairing antiparallel cis XIX | |
| R7-R14 : G-C Ww/Ww pairing antiparallel cis XIX | |
| R8-R13 : G-C Ww/Ww pairing antiparallel cis XIX | |
| S5-S15 : G-C Ww/Ww pairing antiparallel cis XIX | |
| S7-S14 : G-C Ww/Ww pairing antiparallel cis XIX | |
| S8-S13 : G-C Ww/Ww pairing antiparallel cis XIX | |