Residue conformations -------------------------------------------
A1 : GPN
A2 : APN
A3 : APN
A4 : CPN
A5 : TPN
A6 : CPN
B7 : G C2p_exo anti
B8 : A C2p_exo anti
B9 : G C3p_endo anti
B10 : U C3p_endo anti
B11 : U C3p_endo anti
B12 : C C3p_endo anti
Adjacent stackings ----------------------------------------------
B7-B8 : adjacent_5p upward 
B8-B9 : adjacent_5p upward 
B9-B10 : adjacent_5p upward 
B11-B12 : adjacent_5p upward 
Non-Adjacent stackings ------------------------------------------
Number of stackings = 4
Number of adjacent stackings = 4
Number of non adjacent stackings = 0
Base-pairs ------------------------------------------------------
A1-B12 : GPN-C pairing parallel one_hbond 
Residue conformations -------------------------------------------
A1 : GPN
A2 : APN
A3 : APN
A4 : CPN
A5 : TPN
A6 : CPN
B7 : G C2p_exo anti
B8 : A C3p_endo anti
B9 : G C3p_endo anti
B10 : U C3p_endo anti
B11 : U C3p_endo anti
B12 : C C3p_endo anti
Adjacent stackings ----------------------------------------------
B7-B8 : adjacent_5p upward 
B8-B9 : adjacent_5p upward 
B9-B10 : adjacent_5p upward 
B11-B12 : adjacent_5p upward 
Non-Adjacent stackings ------------------------------------------
Number of stackings = 4
Number of adjacent stackings = 4
Number of non adjacent stackings = 0
Base-pairs ------------------------------------------------------
A1-B12 : GPN-C pairing parallel one_hbond 
Residue conformations -------------------------------------------
A1 : GPN
A2 : APN
A3 : APN
A4 : CPN
A5 : TPN
A6 : CPN
B7 : G C2p_exo anti
B8 : A C3p_endo anti
B9 : G C3p_endo anti
B10 : U C3p_endo anti
B11 : U C3p_endo anti
B12 : C C3p_endo anti
Adjacent stackings ----------------------------------------------
B7-B8 : adjacent_5p upward 
B8-B9 : adjacent_5p upward 
B9-B10 : adjacent_5p upward 
Non-Adjacent stackings ------------------------------------------
Number of stackings = 3
Number of adjacent stackings = 3
Number of non adjacent stackings = 0
Base-pairs ------------------------------------------------------
A1-B12 : GPN-C pairing parallel one_hbond 
Residue conformations -------------------------------------------
A1 : GPN
A2 : APN
A3 : APN
A4 : CPN
A5 : TPN
A6 : CPN
B7 : G C2p_exo anti
B8 : A C3p_endo anti
B9 : G C2p_exo anti
B10 : U C3p_endo anti
B11 : U C3p_endo anti
B12 : C C3p_endo anti
Adjacent stackings ----------------------------------------------
B7-B8 : adjacent_5p upward 
B8-B9 : adjacent_5p upward 
B9-B10 : adjacent_5p upward 
B11-B12 : adjacent_5p upward 
Non-Adjacent stackings ------------------------------------------
Number of stackings = 4
Number of adjacent stackings = 4
Number of non adjacent stackings = 0
Base-pairs ------------------------------------------------------
A1-B12 : GPN-C pairing parallel one_hbond 
Residue conformations -------------------------------------------
A1 : GPN
A2 : APN
A3 : APN
A4 : CPN
A5 : TPN
A6 : CPN
B7 : G C2p_exo anti
B8 : A C3p_endo anti
B9 : G C2p_exo anti
B10 : U C3p_endo anti
B11 : U C3p_endo anti
B12 : C C3p_endo anti
Adjacent stackings ----------------------------------------------
B7-B8 : adjacent_5p upward 
B8-B9 : adjacent_5p upward 
B9-B10 : adjacent_5p upward 
B10-B11 : adjacent_5p upward 
B11-B12 : adjacent_5p upward 
Non-Adjacent stackings ------------------------------------------
Number of stackings = 5
Number of adjacent stackings = 5
Number of non adjacent stackings = 0
Base-pairs ------------------------------------------------------
A1-B12 : GPN-C pairing parallel one_hbond 
Residue conformations -------------------------------------------
A1 : GPN
A2 : APN
A3 : APN
A4 : CPN
A5 : TPN
A6 : CPN
B7 : G C2p_exo anti
B8 : A C3p_endo anti
B9 : G C2p_exo anti
B10 : U C3p_endo anti
B11 : U C3p_endo anti
B12 : C C3p_endo anti
Adjacent stackings ----------------------------------------------
B7-B8 : adjacent_5p upward 
B8-B9 : adjacent_5p upward 
B9-B10 : adjacent_5p upward 
Non-Adjacent stackings ------------------------------------------
Number of stackings = 3
Number of adjacent stackings = 3
Number of non adjacent stackings = 0
Base-pairs ------------------------------------------------------
A1-B12 : GPN-C pairing parallel one_hbond 
Residue conformations -------------------------------------------
A1 : GPN
A2 : APN
A3 : APN
A4 : CPN
A5 : TPN
A6 : CPN
B7 : G C2p_exo anti
B8 : A C3p_endo anti
B9 : G C3p_endo anti
B10 : U C3p_endo anti
B11 : U C3p_endo anti
B12 : C C3p_endo anti
Adjacent stackings ----------------------------------------------
B7-B8 : adjacent_5p upward 
B8-B9 : adjacent_5p upward 
B9-B10 : adjacent_5p upward 
B11-B12 : adjacent_5p upward 
Non-Adjacent stackings ------------------------------------------
Number of stackings = 4
Number of adjacent stackings = 4
Number of non adjacent stackings = 0
Base-pairs ------------------------------------------------------
A1-B12 : GPN-C pairing parallel one_hbond 
Residue conformations -------------------------------------------
A1 : GPN
A2 : APN
A3 : APN
A4 : CPN
A5 : TPN
A6 : CPN
B7 : G C2p_exo anti
B8 : A C3p_endo anti
B9 : G C2p_exo anti
B10 : U C3p_endo anti
B11 : U C3p_endo anti
B12 : C C3p_endo anti
Adjacent stackings ----------------------------------------------
B7-B8 : adjacent_5p upward 
B8-B9 : adjacent_5p upward 
B9-B10 : adjacent_5p upward 
B10-B11 : adjacent_5p upward 
B11-B12 : adjacent_5p upward 
Non-Adjacent stackings ------------------------------------------
Number of stackings = 5
Number of adjacent stackings = 5
Number of non adjacent stackings = 0
Base-pairs ------------------------------------------------------
A1-B12 : GPN-C pairing parallel one_hbond 
Residue conformations -------------------------------------------
A1 : GPN
A2 : APN
A3 : APN
A4 : CPN
A5 : TPN
A6 : CPN
B7 : G C2p_exo anti
B8 : A C3p_endo anti
B9 : G C3p_endo anti
B10 : U C3p_endo anti
B11 : U C3p_endo anti
B12 : C C3p_endo anti
Adjacent stackings ----------------------------------------------
B7-B8 : adjacent_5p upward 
B8-B9 : adjacent_5p upward 
B9-B10 : adjacent_5p upward 
B11-B12 : adjacent_5p upward 
Non-Adjacent stackings ------------------------------------------
Number of stackings = 4
Number of adjacent stackings = 4
Number of non adjacent stackings = 0
Base-pairs ------------------------------------------------------
A1-B12 : GPN-C pairing parallel one_hbond 
Residue conformations -------------------------------------------
A1 : GPN
A2 : APN
A3 : APN
A4 : CPN
A5 : TPN
A6 : CPN
B7 : G C2p_exo anti
B8 : A C2p_exo anti
B9 : G C3p_endo anti
B10 : U C3p_endo anti
B11 : U C3p_endo anti
B12 : C C3p_endo anti
Adjacent stackings ----------------------------------------------
B7-B8 : adjacent_5p upward 
B8-B9 : adjacent_5p upward 
B9-B10 : adjacent_5p upward 
Non-Adjacent stackings ------------------------------------------
Number of stackings = 3
Number of adjacent stackings = 3
Number of non adjacent stackings = 0
Base-pairs ------------------------------------------------------
A1-B12 : GPN-C pairing parallel one_hbond