modeling_nt_bert.py

import os
import math
import torch
import torch.nn as nn
import torch.nn.functional as F
from einops import rearrange
from huggingface_hub import hf_hub_download
from mup import MuReadout, set_base_shapes
from mup.init import normal_
from .configuring_nt_bert import BertConfig
from rotary_embedding_torch import RotaryEmbedding
from transformers.modeling_outputs import (
    BaseModelOutputWithPastAndCrossAttentions,
    MaskedLMOutput,
)
from transformers.modeling_utils import (
    PreTrainedModel,
    apply_chunking_to_forward,
    find_pruneable_heads_and_indices,
    get_activation,
    prune_linear_layer,
)


class BertPreTrainedModel(PreTrainedModel):
    """
    An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
    models.
    """

    config_class = BertConfig
    base_model_prefix = "bert"
    _keys_to_ignore_on_load_missing = [r"position_ids"]
    _keys_to_ignore_on_load_unexpected = [
        r"bert\.embeddings_project\.weight",
        r"bert\.embeddings_project\.bias",
    ]

    # Copied from transformers.models.bert.modeling_bert.BertPreTrainedModel._init_weights
    def _init_weights(self, module, readout_zero_init=False, query_zero_init=False):
        """Initialize the weights"""
        if isinstance(module, nn.Linear):
            # Slightly different from the TF version which uses truncated_normal for initialization
            # cf https://github.com/pytorch/pytorch/pull/5617
            ### muP: swap constant std normal init with normal_ from `mup.init`.
            ### Because `_init_weights` is called in `__init__`, before `infshape` is set,
            ### we need to manually call `self.apply(self._init_weights)` after calling
            ### `set_base_shape(model, base)`
            if isinstance(module, MuReadout) and readout_zero_init:
                module.weight.data.zero_()
            else:
                if hasattr(module.weight, "infshape"):
                    normal_(module.weight, mean=0.0, std=self.config.initializer_range)
                else:
                    module.weight.data.normal_(
                        mean=0.0, std=self.config.initializer_range
                    )
            ### End muP
            if module.bias is not None:
                module.bias.data.zero_()
        elif isinstance(module, nn.Embedding):
            module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
            if module.padding_idx is not None:
                module.weight.data[module.padding_idx].zero_()
        elif isinstance(module, nn.LayerNorm):
            module.bias.data.zero_()
            module.weight.data.fill_(1.0)
        ### muP
        if isinstance(module, BertSelfAttention):
            if query_zero_init:
                module.query.weight.data[:] = 0

    @classmethod
    def from_pretrained(cls, pretrained_model_name_or_path, *model_args, **kwargs):
        model = super().from_pretrained(
            pretrained_model_name_or_path, *model_args, **kwargs
        )

        # since we used MuP, need to reset values since they're not saved with the model
        if os.path.exists("base_shapes.bsh") is False:
            path = hf_hub_download(
                "zpn/human_bp_bert", "base_shapes.bsh"
            )
        else:
           path = "base_shapes.bsh"
            
        set_base_shapes(model, path, rescale_params=False)

        return model


class BertEmbeddings(nn.Module):
    """Construct the embeddings from word, position and token_type embeddings."""

    def __init__(self, config):
        super().__init__()
        self.word_embeddings = nn.Embedding(
            config.vocab_size, config.embedding_size, padding_idx=config.pad_token_id
        )
        self.position_embeddings = nn.Embedding(
            config.max_position_embeddings, config.embedding_size
        )
        self.token_type_embeddings = nn.Embedding(
            config.type_vocab_size, config.embedding_size
        )

        # self.LayerNorm is not snake-cased to stick with TensorFlow model variable name and be able to load
        # any TensorFlow checkpoint file

        if config.embedding_norm_layer_type == "layer_norm":
            self.norm = nn.LayerNorm(config.embedding_size, eps=config.layer_norm_eps)
        elif config.embedding_norm_layer_type == "group_norm":
            self.norm = nn.GroupNorm(
                num_groups=config.embedding_num_groups,
                num_channels=config.embedding_size,
            )
        else:
            raise ValueError(
                f"Unknown attn_norm_layer_type {config.attn_norm_layer_type}"
            )

        self.dropout = nn.Dropout(config.hidden_dropout_prob)

        # position_ids (1, len position emb) is contiguous in memory and exported when serialized
        self.register_buffer(
            "position_ids", torch.arange(config.max_position_embeddings).expand((1, -1))
        )
        self.position_embedding_type = getattr(
            config, "position_embedding_type", "absolute"
        )

        self.register_buffer(
            "token_type_ids",
            torch.zeros(
                self.position_ids.size(),
                dtype=torch.long,
                device=self.position_ids.device,
            ),
            persistent=False,
        )

    def forward(
        self,
        input_ids=None,
        token_type_ids=None,
        position_ids=None,
        inputs_embeds=None,
        past_key_values_length=0,
    ):
        if input_ids is not None:
            input_shape = input_ids.size()
        else:
            input_shape = inputs_embeds.size()[:-1]

        seq_length = input_shape[1]

        if position_ids is None:
            position_ids = self.position_ids[
                :, past_key_values_length : seq_length + past_key_values_length
            ]

        # Setting the token_type_ids to the registered buffer in constructor where it is all zeros, which usually occurs
        # when its auto-generated, registered buffer helps users when tracing the model without passing token_type_ids, solves
        # issue #5664
        if token_type_ids is None:
            if hasattr(self, "token_type_ids"):
                buffered_token_type_ids = self.token_type_ids[:, :seq_length]
                buffered_token_type_ids_expanded = buffered_token_type_ids.expand(
                    input_shape[0], seq_length
                )
                token_type_ids = buffered_token_type_ids_expanded
            else:
                token_type_ids = torch.zeros(
                    input_shape, dtype=torch.long, device=self.position_ids.device
                )

        if inputs_embeds is None:
            inputs_embeds = self.word_embeddings(input_ids)
        token_type_embeddings = self.token_type_embeddings(token_type_ids)

        embeddings = inputs_embeds + token_type_embeddings
        if self.position_embedding_type == "absolute":
            position_embeddings = self.position_embeddings(position_ids)
            embeddings += position_embeddings

        if isinstance(self.norm, nn.GroupNorm):
            # group norm only works over channel dim
            reshaped = embeddings.permute(0, 2, 1)
            embeddings = self.norm(reshaped)
            embeddings = embeddings.permute(0, 2, 1)
        else:
            embeddings = self.norm(embeddings)

        embeddings = self.dropout(embeddings)
        return embeddings


class BertIntermediate(nn.Module):
    def __init__(self, config):
        super().__init__()
        self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
        if isinstance(config.hidden_act, str):
            self.intermediate_act_fn = get_activation(config.hidden_act)
        else:
            self.intermediate_act_fn = config.hidden_act

    def forward(self, hidden_states):
        hidden_states = self.dense(hidden_states)
        hidden_states = self.intermediate_act_fn(hidden_states)
        return hidden_states


class BertLayer(nn.Module):
    def __init__(self, config):
        super().__init__()
        self.chunk_size_feed_forward = config.chunk_size_feed_forward
        self.seq_len_dim = 1
        self.attention = BertAttention(config)
        self.is_decoder = config.is_decoder
        self.add_cross_attention = config.add_cross_attention
        if self.add_cross_attention:
            assert (
                self.is_decoder
            ), f"{self} should be used as a decoder model if cross attention is added"
            self.crossattention = BertAttention(config)
        self.intermediate = BertIntermediate(config)
        self.output = BertOutput(config)

    def forward(
        self,
        hidden_states,
        attention_mask=None,
        head_mask=None,
        encoder_hidden_states=None,
        encoder_attention_mask=None,
        past_key_value=None,
        output_attentions=False,
    ):
        # decoder uni-directional self-attention cached key/values tuple is at positions 1,2
        self_attn_past_key_value = (
            past_key_value[:2] if past_key_value is not None else None
        )
        self_attention_outputs = self.attention(
            hidden_states,
            attention_mask,
            head_mask,
            output_attentions=output_attentions,
            past_key_value=self_attn_past_key_value,
        )
        attention_output = self_attention_outputs[0]

        # if decoder, the last output is tuple of self-attn cache
        if self.is_decoder:
            outputs = self_attention_outputs[1:-1]
            present_key_value = self_attention_outputs[-1]
        else:
            outputs = self_attention_outputs[
                1:
            ]  # add self attentions if we output attention weights

        cross_attn_present_key_value = None
        if self.is_decoder and encoder_hidden_states is not None:
            assert hasattr(
                self, "crossattention"
            ), f"If `encoder_hidden_states` are passed, {self} has to be instantiated with cross-attention layers by setting `config.add_cross_attention=True`"

            # cross_attn cached key/values tuple is at positions 3,4 of past_key_value tuple
            cross_attn_past_key_value = (
                past_key_value[-2:] if past_key_value is not None else None
            )
            cross_attention_outputs = self.crossattention(
                attention_output,
                attention_mask,
                head_mask,
                encoder_hidden_states,
                encoder_attention_mask,
                cross_attn_past_key_value,
                output_attentions,
            )
            attention_output = cross_attention_outputs[0]
            outputs = (
                outputs + cross_attention_outputs[1:-1]
            )  # add cross attentions if we output attention weights

            # add cross-attn cache to positions 3,4 of present_key_value tuple
            cross_attn_present_key_value = cross_attention_outputs[-1]
            present_key_value = present_key_value + cross_attn_present_key_value

        layer_output = apply_chunking_to_forward(
            self.feed_forward_chunk,
            self.chunk_size_feed_forward,
            self.seq_len_dim,
            attention_output,
        )
        outputs = (layer_output,) + outputs

        # if decoder, return the attn key/values as the last output
        if self.is_decoder:
            outputs = outputs + (present_key_value,)

        return outputs

    def feed_forward_chunk(self, attention_output):
        intermediate_output = self.intermediate(attention_output)
        layer_output = self.output(intermediate_output, attention_output)
        return layer_output


class BertEncoder(nn.Module):
    def __init__(self, config):
        super().__init__()
        self.config = config
        self.layer = nn.ModuleList(
            [BertLayer(config) for _ in range(config.num_hidden_layers)]
        )

    def forward(
        self,
        hidden_states,
        attention_mask=None,
        head_mask=None,
        encoder_hidden_states=None,
        encoder_attention_mask=None,
        past_key_values=None,
        use_cache=None,
        output_attentions=False,
        output_hidden_states=False,
        return_dict=True,
    ):
        all_hidden_states = () if output_hidden_states else None
        all_self_attentions = () if output_attentions else None
        all_cross_attentions = (
            () if output_attentions and self.config.add_cross_attention else None
        )

        next_decoder_cache = () if use_cache else None
        for i, layer_module in enumerate(self.layer):
            if output_hidden_states:
                all_hidden_states = all_hidden_states + (hidden_states,)

            layer_head_mask = head_mask[i] if head_mask is not None else None
            past_key_value = past_key_values[i] if past_key_values is not None else None

            if getattr(self.config, "gradient_checkpointing", False) and self.training:
                if use_cache:
                    use_cache = False

                def create_custom_forward(module):
                    def custom_forward(*inputs):
                        return module(*inputs, past_key_value, output_attentions)

                    return custom_forward

                layer_outputs = torch.utils.checkpoint.checkpoint(
                    create_custom_forward(layer_module),
                    hidden_states,
                    attention_mask,
                    layer_head_mask,
                    encoder_hidden_states,
                    encoder_attention_mask,
                )
            else:
                layer_outputs = layer_module(
                    hidden_states,
                    attention_mask,
                    layer_head_mask,
                    encoder_hidden_states,
                    encoder_attention_mask,
                    past_key_value,
                    output_attentions,
                )

            hidden_states = layer_outputs[0]
            if use_cache:
                next_decoder_cache += (layer_outputs[-1],)
            if output_attentions:
                all_self_attentions = all_self_attentions + (layer_outputs[1],)
                if self.config.add_cross_attention:
                    all_cross_attentions = all_cross_attentions + (layer_outputs[2],)

        if output_hidden_states:
            all_hidden_states = all_hidden_states + (hidden_states,)

        if not return_dict:
            return tuple(
                v
                for v in [
                    hidden_states,
                    next_decoder_cache,
                    all_hidden_states,
                    all_self_attentions,
                    all_cross_attentions,
                ]
                if v is not None
            )
        return BaseModelOutputWithPastAndCrossAttentions(
            last_hidden_state=hidden_states,
            past_key_values=next_decoder_cache,
            hidden_states=all_hidden_states,
            attentions=all_self_attentions,
            cross_attentions=all_cross_attentions,
        )


class BertOutput(nn.Module):
    def __init__(self, config):
        super().__init__()
        self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
        self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
        self.dropout = nn.Dropout(config.hidden_dropout_prob)

    def forward(self, hidden_states, input_tensor):
        hidden_states = self.dense(hidden_states)
        hidden_states = self.dropout(hidden_states)
        hidden_states = self.LayerNorm(hidden_states + input_tensor)
        return hidden_states


# shamelessly stolen from: https://github.com/lucidrains/x-transformers/blob/fb1671342d3b27a748336873c225fbd4dd66b7a1/x_transformers/x_transformers.py#L267
class AlibiPositionalBias(nn.Module):
    def __init__(self, heads, **kwargs):
        super().__init__()
        self.heads = heads
        slopes = torch.Tensor(self._get_slopes(heads))
        slopes = rearrange(slopes, "h -> h 1 1")
        self.register_buffer("slopes", slopes, persistent=False)
        self.register_buffer("bias", None, persistent=False)

    def get_bias(self, i, j, device):
        i_arange = torch.arange(j - i, j, device=device)
        j_arange = torch.arange(j, device=device)
        bias = -torch.abs(
            rearrange(j_arange, "j -> 1 1 j") - rearrange(i_arange, "i -> 1 i 1")
        )
        return bias

    @staticmethod
    def _get_slopes(heads):
        def get_slopes_power_of_2(n):
            start = 2 ** (-(2 ** -(math.log2(n) - 3)))
            ratio = start
            return [start * ratio**i for i in range(n)]

        if math.log2(heads).is_integer():
            return get_slopes_power_of_2(heads)

        closest_power_of_2 = 2 ** math.floor(math.log2(heads))
        return (
            get_slopes_power_of_2(closest_power_of_2)
            + get_slopes_power_of_2(2 * closest_power_of_2)[0::2][
                : heads - closest_power_of_2
            ]
        )

    def forward(self, qk_dots):
        h, i, j, device = *qk_dots.shape[-3:], qk_dots.device

        if self.bias is not None and self.bias.shape[-1] >= j:
            return qk_dots + self.bias[..., :i, :j]

        bias = self.get_bias(i, j, device)
        bias = bias * self.slopes

        num_heads_unalibied = h - bias.shape[0]
        bias = F.pad(bias, (0, 0, 0, 0, 0, num_heads_unalibied))
        self.register_buffer("bias", bias, persistent=False)

        return qk_dots + self.bias


class BertModel(BertPreTrainedModel):
    def __init__(self, config):
        super().__init__(config)
        self.embeddings = BertEmbeddings(config)

        if config.embedding_size != config.hidden_size:
            self.embeddings_project = nn.Linear(
                config.embedding_size, config.hidden_size
            )

        self.encoder = BertEncoder(config)
        self.config = config
        self.init_weights()

    def get_input_embeddings(self):
        return self.embeddings.word_embeddings

    def set_input_embeddings(self, value):
        self.embeddings.word_embeddings = value

    def _prune_heads(self, heads_to_prune):
        """
        Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
        class PreTrainedModel
        """
        for layer, heads in heads_to_prune.items():
            self.encoder.layer[layer].attention.prune_heads(heads)

    def forward(
        self,
        input_ids=None,
        attention_mask=None,
        token_type_ids=None,
        position_ids=None,
        head_mask=None,
        inputs_embeds=None,
        output_attentions=None,
        output_hidden_states=None,
        return_dict=None,
    ):
        output_attentions = (
            output_attentions
            if output_attentions is not None
            else self.config.output_attentions
        )
        output_hidden_states = (
            output_hidden_states
            if output_hidden_states is not None
            else self.config.output_hidden_states
        )
        return_dict = (
            return_dict if return_dict is not None else self.config.use_return_dict
        )

        if input_ids is not None and inputs_embeds is not None:
            raise ValueError(
                "You cannot specify both input_ids and inputs_embeds at the same time"
            )
        elif input_ids is not None:
            input_shape = input_ids.size()
            batch_size, seq_length = input_shape
        elif inputs_embeds is not None:
            input_shape = inputs_embeds.size()[:-1]
        else:
            raise ValueError("You have to specify either input_ids or inputs_embeds")

        device = input_ids.device if input_ids is not None else inputs_embeds.device

        if attention_mask is None:
            attention_mask = torch.ones(input_shape, device=device)
        if token_type_ids is None:
            if hasattr(self.embeddings, "token_type_ids"):
                buffered_token_type_ids = self.embeddings.token_type_ids[:, :seq_length]
                buffered_token_type_ids_expanded = buffered_token_type_ids.expand(
                    batch_size, seq_length
                )
                token_type_ids = buffered_token_type_ids_expanded
            else:
                token_type_ids = torch.zeros(
                    input_shape, dtype=torch.long, device=device
                )

        extended_attention_mask = self.get_extended_attention_mask(
            attention_mask, input_shape, device
        )
        head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)

        hidden_states = self.embeddings(
            input_ids=input_ids,
            position_ids=position_ids,
            token_type_ids=token_type_ids,
            inputs_embeds=inputs_embeds,
        )

        if hasattr(self, "embeddings_project"):
            hidden_states = self.embeddings_project(hidden_states)

        hidden_states = self.encoder(
            hidden_states,
            attention_mask=extended_attention_mask,
            head_mask=head_mask,
            output_attentions=output_attentions,
            output_hidden_states=output_hidden_states,
            return_dict=return_dict,
        )

        return hidden_states


class BertSelfOutput(nn.Module):
    def __init__(self, config):
        super().__init__()
        self.dense = nn.Linear(config.hidden_size, config.hidden_size)
        if config.prenorm:
            self.norm = nn.Identity()
        else:
            if config.attn_norm_layer_type == "layer_norm":
                self.norm = nn.LayerNorm(config.hidden_size)
            elif config.attn_norm_layer_type == "group_norm":
                self.norm = nn.GroupNorm(
                    num_groups=config.attn_num_groups, num_channels=config.hidden_size
                )
            else:
                raise ValueError(
                    f"Unknown attn_norm_layer_type {config.attn_norm_layer_type}"
                )

        self.dropout = nn.Dropout(config.hidden_dropout_prob)

    def forward(self, hidden_states, input_tensor):
        hidden_states = self.dense(hidden_states)
        hidden_states = self.dropout(hidden_states)
        if isinstance(self.norm, nn.GroupNorm):
            reshaped = hidden_states + input_tensor
            # group norm only works over channel dim
            reshaped = reshaped.permute(0, 2, 1)
            hidden_states = self.norm(reshaped)
            hidden_states = hidden_states.permute(0, 2, 1)
        else:
            hidden_states = self.norm(hidden_states + input_tensor)
        return hidden_states


class BertSelfAttention(nn.Module):
    def __init__(self, config):
        super().__init__()
        if config.hidden_size % config.num_attention_heads != 0 and not hasattr(
            config, "embedding_size"
        ):
            raise ValueError(
                f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
                f"heads ({config.num_attention_heads})"
            )

        self.num_attention_heads = config.num_attention_heads
        self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
        self.all_head_size = self.num_attention_heads * self.attention_head_size

        self.query = nn.Linear(config.hidden_size, self.all_head_size)
        self.key = nn.Linear(config.hidden_size, self.all_head_size)
        self.value = nn.Linear(config.hidden_size, self.all_head_size)

        self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
        self.position_embedding_type = getattr(
            config, "position_embedding_type", "absolute"
        )
        if (
            self.position_embedding_type == "relative_key"
            or self.position_embedding_type == "relative_key_query"
        ):
            self.max_position_embeddings = config.max_position_embeddings
            self.distance_embedding = nn.Embedding(
                2 * config.max_position_embeddings - 1, self.attention_head_size
            )
        elif self.position_embedding_type == "rotary":
            self.rotary = RotaryEmbedding(dim=self.attention_head_size)
        elif self.position_embedding_type == "alibi":
            self.alibi = AlibiPositionalBias(self.num_attention_heads)

        self.is_decoder = config.is_decoder

        if config.mup:
            self.attention_scaling_factor = self.attention_head_size
        else:
            self.attention_scaling_factor = math.sqrt(self.attention_head_size)

    def transpose_for_scores(self, x):
        new_x_shape = x.size()[:-1] + (
            self.num_attention_heads,
            self.attention_head_size,
        )
        x = x.view(*new_x_shape)
        return x.permute(0, 2, 1, 3)

    def forward(
        self,
        hidden_states,
        attention_mask=None,
        head_mask=None,
        encoder_hidden_states=None,
        encoder_attention_mask=None,
        past_key_value=None,
        output_attentions=False,
    ):
        mixed_query_layer = self.query(hidden_states)

        # If this is instantiated as a cross-attention module, the keys
        # and values come from an encoder; the attention mask needs to be
        # such that the encoder's padding tokens are not attended to.
        is_cross_attention = encoder_hidden_states is not None

        if is_cross_attention and past_key_value is not None:
            # reuse k,v, cross_attentions
            key_layer = past_key_value[0]
            value_layer = past_key_value[1]
            attention_mask = encoder_attention_mask
        elif is_cross_attention:
            key_layer = self.transpose_for_scores(self.key(encoder_hidden_states))
            value_layer = self.transpose_for_scores(self.value(encoder_hidden_states))
            attention_mask = encoder_attention_mask
        elif past_key_value is not None:
            key_layer = self.transpose_for_scores(self.key(hidden_states))
            value_layer = self.transpose_for_scores(self.value(hidden_states))
            key_layer = torch.cat([past_key_value[0], key_layer], dim=2)
            value_layer = torch.cat([past_key_value[1], value_layer], dim=2)
        else:
            key_layer = self.transpose_for_scores(self.key(hidden_states))
            value_layer = self.transpose_for_scores(self.value(hidden_states))

        query_layer = self.transpose_for_scores(mixed_query_layer)

        if self.is_decoder:
            # if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
            # Further calls to cross_attention layer can then reuse all cross-attention
            # key/value_states (first "if" case)
            # if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of
            # all previous decoder key/value_states. Further calls to uni-directional self-attention
            # can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
            # if encoder bi-directional self-attention `past_key_value` is always `None`
            past_key_value = (key_layer, value_layer)

        if self.position_embedding_type == "rotary":
            query_layer = self.rotary.rotate_queries_or_keys(query_layer)
            key_layer = self.rotary.rotate_queries_or_keys(key_layer)

        # Take the dot product between "query" and "key" to get the raw attention scores.
        attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))

        if (
            self.position_embedding_type == "relative_key"
            or self.position_embedding_type == "relative_key_query"
        ):
            seq_length = hidden_states.size()[1]
            position_ids_l = torch.arange(
                seq_length, dtype=torch.long, device=hidden_states.device
            ).view(-1, 1)
            position_ids_r = torch.arange(
                seq_length, dtype=torch.long, device=hidden_states.device
            ).view(1, -1)
            distance = position_ids_l - position_ids_r
            positional_embedding = self.distance_embedding(
                distance + self.max_position_embeddings - 1
            )
            positional_embedding = positional_embedding.to(
                dtype=query_layer.dtype
            )  # fp16 compatibility

            if self.position_embedding_type == "relative_key":
                relative_position_scores = torch.einsum(
                    "bhld,lrd->bhlr", query_layer, positional_embedding
                )
                attention_scores = attention_scores + relative_position_scores
            elif self.position_embedding_type == "relative_key_query":
                relative_position_scores_query = torch.einsum(
                    "bhld,lrd->bhlr", query_layer, positional_embedding
                )
                relative_position_scores_key = torch.einsum(
                    "bhrd,lrd->bhlr", key_layer, positional_embedding
                )
                attention_scores = (
                    attention_scores
                    + relative_position_scores_query
                    + relative_position_scores_key
                )

        # attention scaling -> for mup need to rescale to 1/d
        attention_scores = attention_scores / self.attention_scaling_factor

        if self.position_embedding_type == "alibi":
            attention_scores = self.alibi(attention_scores)

        if attention_mask is not None:
            # Apply the attention mask is (precomputed for all layers in ElectraModel forward() function)
            attention_scores = attention_scores + attention_mask

        # Normalize the attention scores to probabilities.
        attention_probs = nn.Softmax(dim=-1)(attention_scores)

        # This is actually dropping out entire tokens to attend to, which might
        # seem a bit unusual, but is taken from the original Transformer paper.
        attention_probs = self.dropout(attention_probs)

        # Mask heads if we want to
        if head_mask is not None:
            attention_probs = attention_probs * head_mask

        context_layer = torch.matmul(attention_probs, value_layer)

        context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
        new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
        context_layer = context_layer.view(*new_context_layer_shape)

        outputs = (
            (context_layer, attention_probs) if output_attentions else (context_layer,)
        )

        if self.is_decoder:
            outputs = outputs + (past_key_value,)
        return outputs


class BertAttention(nn.Module):
    def __init__(self, config):
        super().__init__()
        self.self = BertSelfAttention(config)
        self.output = BertSelfOutput(config)
        if config.prenorm:
            if config.attn_norm_layer_type == "layer_norm":
                self.prenorm = nn.LayerNorm(
                    config.hidden_size, eps=config.layer_norm_eps
                )
            elif config.attn_norm_layer_type == "group_norm":
                self.prenorm = nn.GroupNorm(
                    num_groups=config.attn_num_groups,
                    num_channels=config.hidden_size,
                    eps=config.layer_norm_eps,
                )
            else:
                raise ValueError(
                    f"Unknown attn_norm_layer_type {config.attn_norm_layer_type}"
                )
        else:
            self.prenorm = nn.Identity()

        self.pruned_heads = set()

    def prune_heads(self, heads):
        if len(heads) == 0:
            return
        heads, index = find_pruneable_heads_and_indices(
            heads,
            self.self.num_attention_heads,
            self.self.attention_head_size,
            self.pruned_heads,
        )

        # Prune linear layers
        self.self.query = prune_linear_layer(self.self.query, index)
        self.self.key = prune_linear_layer(self.self.key, index)
        self.self.value = prune_linear_layer(self.self.value, index)
        self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)

        # Update hyper params and store pruned heads
        self.self.num_attention_heads = self.self.num_attention_heads - len(heads)
        self.self.all_head_size = (
            self.self.attention_head_size * self.self.num_attention_heads
        )
        self.pruned_heads = self.pruned_heads.union(heads)

    def forward(
        self,
        hidden_states,
        attention_mask=None,
        head_mask=None,
        encoder_hidden_states=None,
        encoder_attention_mask=None,
        past_key_value=None,
        output_attentions=False,
    ):
        # if we are doing prenorm instead of postnorm
        if isinstance(self.prenorm, nn.GroupNorm):
            # group norm only works over channel dim
            reshaped = hidden_states.permute(0, 2, 1)
            hidden_states = self.prenorm(reshaped)
            hidden_states = hidden_states.permute(0, 2, 1)
        else:
            hidden_states = self.prenorm(hidden_states)

        self_outputs = self.self(
            hidden_states,
            attention_mask,
            head_mask,
            encoder_hidden_states,
            encoder_attention_mask,
            past_key_value,
            output_attentions,
        )
        attention_output = self.output(self_outputs[0], hidden_states)
        outputs = (attention_output,) + self_outputs[
            1:
        ]  # add attentions if we output them
        return outputs


class BertPredictionHeadTransform(nn.Module):
    def __init__(self, config):
        super().__init__()
        self.dense = nn.Linear(config.hidden_size, config.hidden_size)
        if isinstance(config.hidden_act, str):
            self.transform_act_fn = get_activation(config.hidden_act)
        else:
            self.transform_act_fn = config.hidden_act
        self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)

    def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
        hidden_states = self.dense(hidden_states)
        hidden_states = self.transform_act_fn(hidden_states)
        hidden_states = self.LayerNorm(hidden_states)
        return hidden_states


class BertLMPredictionHead(nn.Module):
    def __init__(self, config):
        super().__init__()
        self.transform = BertPredictionHeadTransform(config)

        # The output weights are the same as the input embeddings, but there is
        # an output-only bias for each token.
        if config.mup:
            self.decoder = MuReadout(
                config.hidden_size,
                config.vocab_size,
                output_mult=config.output_mult,
                readout_zero_init=config.readout_zero_init,
                bias=False,
            )
        else:
            self.decoder = nn.Linear(config.hidden_size, config.vocab_size, bias=False)

        self.bias = nn.Parameter(torch.zeros(config.vocab_size))

        # Need a link between the two variables so that the bias is correctly resized with `resize_token_embeddings`
        self.decoder.bias = self.bias

    def forward(self, hidden_states):
        hidden_states = self.transform(hidden_states)
        hidden_states = self.decoder(hidden_states)
        return hidden_states


class BertOnlyMLMHead(nn.Module):
    def __init__(self, config):
        super().__init__()
        self.predictions = BertLMPredictionHead(config)

    def forward(self, sequence_output: torch.Tensor) -> torch.Tensor:
        prediction_scores = self.predictions(sequence_output)
        return prediction_scores


class BertForMaskedLM(BertPreTrainedModel):
    def __init__(self, config):
        super().__init__(config)

        self.bert = BertModel(config)
        self.cls = BertOnlyMLMHead(config)

        self.init_weights()

    def get_output_embeddings(self):
        return self.cls.predictions.decoder

    def set_output_embeddings(self, new_embeddings):
        self.cls.predictions.decoder = new_embeddings

    def forward(
        self,
        input_ids=None,
        attention_mask=None,
        token_type_ids=None,
        position_ids=None,
        head_mask=None,
        inputs_embeds=None,
        labels=None,
        output_attentions=None,
        output_hidden_states=None,
        return_dict=None,
    ):
        r"""
        labels (:obj:`torch.LongTensor` of shape :obj:`(batch_size, sequence_length)`, `optional`):
            Labels for computing the masked language modeling loss. Indices should be in ``[-100, 0, ...,
            config.vocab_size]`` (see ``input_ids`` docstring) Tokens with indices set to ``-100`` are ignored
            (masked), the loss is only computed for the tokens with labels in ``[0, ..., config.vocab_size]``
        """
        return_dict = (
            return_dict if return_dict is not None else self.config.use_return_dict
        )

        outputs = self.bert(
            input_ids,
            attention_mask,
            token_type_ids,
            position_ids,
            head_mask,
            inputs_embeds,
            output_attentions,
            output_hidden_states,
            return_dict,
        )

        sequence_output = outputs[0]
        prediction_scores = self.cls(sequence_output)

        loss = None
        # Masked language modeling softmax layer
        if labels is not None:
            loss_fct = nn.CrossEntropyLoss()  # -100 index = padding token
            loss = loss_fct(
                prediction_scores.view(-1, self.config.vocab_size), labels.view(-1)
            )

        if not return_dict:
            output = (prediction_scores,) + outputs[2:]
            return ((loss,) + output) if loss is not None else output

        return MaskedLMOutput(
            loss=loss,
            logits=prediction_scores,
            hidden_states=outputs.hidden_states,
            attentions=outputs.attentions,
        )