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165d_MC
ADDED
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@@ -0,0 +1,103 @@
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| 1 |
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Residue conformations -------------------------------------------
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| 2 |
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A1 : G C3p_endo anti
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| 3 |
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A2 : C C3p_endo anti
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| 4 |
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A3 : U C3p_endo anti
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| 5 |
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A4 : U C3p_endo anti
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| 6 |
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A5 : C C3p_endo anti
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| 7 |
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A6 : G C3p_endo anti
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| 8 |
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A7 : G C3p_endo anti
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| 9 |
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A8 : C C3p_endo anti
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| 10 |
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A9 : BRU
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| 11 |
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B10 : G C3p_endo anti
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| 12 |
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B11 : C C3p_endo anti
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| 13 |
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B12 : U C3p_endo anti
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| 14 |
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B13 : U C2p_exo anti
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| 15 |
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B14 : C C3p_endo anti
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| 16 |
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B15 : G C3p_endo anti
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| 17 |
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B16 : G C3p_endo anti
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| 18 |
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B17 : C C3p_endo anti
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| 19 |
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B18 : BRU
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| 20 |
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A19 : RHD
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| 21 |
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A20 : RHD
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| 22 |
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A22 : RHD
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B21 : RHD
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| 24 |
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A23 : HOH
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| 25 |
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A25 : HOH
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| 26 |
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A26 : HOH
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| 27 |
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A27 : HOH
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| 28 |
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A28 : HOH
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| 29 |
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A29 : HOH
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| 30 |
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A30 : HOH
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| 31 |
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A31 : HOH
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| 32 |
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A33 : HOH
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| 33 |
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A35 : HOH
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| 34 |
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A36 : HOH
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| 35 |
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A37 : HOH
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| 36 |
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A38 : HOH
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| 37 |
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A41 : HOH
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| 38 |
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A43 : HOH
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| 39 |
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A47 : HOH
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| 40 |
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A48 : HOH
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| 41 |
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A51 : HOH
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| 42 |
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A53 : HOH
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| 43 |
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A54 : HOH
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| 44 |
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A56 : HOH
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| 45 |
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A57 : HOH
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| 46 |
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A59 : HOH
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| 47 |
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A60 : HOH
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| 48 |
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A61 : HOH
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| 49 |
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A63 : HOH
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| 50 |
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A64 : HOH
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| 51 |
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A65 : HOH
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| 52 |
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A66 : HOH
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| 53 |
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A73 : HOH
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| 54 |
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A74 : HOH
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| 55 |
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B24 : HOH
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| 56 |
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B32 : HOH
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| 57 |
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B34 : HOH
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| 58 |
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B39 : HOH
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| 59 |
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B40 : HOH
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| 60 |
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B42 : HOH
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| 61 |
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B44 : HOH
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| 62 |
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B45 : HOH
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| 63 |
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B46 : HOH
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| 64 |
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B49 : HOH
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| 65 |
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B50 : HOH
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| 66 |
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B52 : HOH
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| 67 |
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B55 : HOH
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| 68 |
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B58 : HOH
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| 69 |
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B62 : HOH
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| 70 |
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B67 : HOH
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| 71 |
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B68 : HOH
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| 72 |
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B69 : HOH
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| 73 |
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B70 : HOH
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| 74 |
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B71 : HOH
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| 75 |
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B72 : HOH
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| 76 |
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B75 : HOH
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| 77 |
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B76 : HOH
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| 78 |
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Adjacent stackings ----------------------------------------------
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| 79 |
+
A1-A2 : adjacent_5p upward
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| 80 |
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A2-A3 : adjacent_5p upward
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| 81 |
+
A4-A5 : adjacent_5p upward
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| 82 |
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A5-A6 : adjacent_5p upward
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| 83 |
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A6-A7 : adjacent_5p upward
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| 84 |
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A7-A8 : adjacent_5p upward
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| 85 |
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B10-B11 : adjacent_5p upward
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| 86 |
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B11-B12 : adjacent_5p upward
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| 87 |
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B13-B14 : adjacent_5p upward
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| 88 |
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B14-B15 : adjacent_5p upward
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| 89 |
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B15-B16 : adjacent_5p upward
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| 90 |
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B16-B17 : adjacent_5p upward
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| 91 |
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Non-Adjacent stackings ------------------------------------------
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| 92 |
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Number of stackings = 12
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| 93 |
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Number of adjacent stackings = 12
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| 94 |
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Number of non adjacent stackings = 0
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| 95 |
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Base-pairs ------------------------------------------------------
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| 96 |
+
A1-B17 : G-C Ww/Ww pairing antiparallel cis XIX
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| 97 |
+
A2-B16 : C-G Ww/Ww pairing antiparallel cis XIX
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| 98 |
+
A3-B15 : U-G Ws/Ww pairing antiparallel cis XXVIII
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| 99 |
+
A4-B14 : U-C Wh/Wh pairing antiparallel cis one_hbond
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| 100 |
+
A5-B13 : C-U Wh/Wh pairing antiparallel cis one_hbond
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| 101 |
+
A6-B12 : G-U Ww/Ws pairing antiparallel cis XXVIII
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| 102 |
+
A7-B11 : G-C Ww/Ww pairing antiparallel cis XIX
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| 103 |
+
A8-B10 : C-G Ww/Ww pairing antiparallel cis XIX
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